LOCUS NC_009566 1813033 bp DNA circular BCT 05-SEP-2007
DEFINITION Haemophilus influenzae PittEE, complete genome.
ACCESSION NC_009566
VERSION NC_009566.1 GI:148825133
KEYWORDS .
SOURCE Haemophilus influenzae PittEE
ORGANISM Haemophilus influenzae PittEE
Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales;
Pasteurellaceae; Haemophilus.
REFERENCE 1 (bases 1 to 1813033)
AUTHORS Hogg,J.S., Hu,F.Z., Janto,B., Boissy,R., Hayes,J., Keefe,R.,
Post,J.C. and Ehrlich,G.D.
TITLE Characterization and modeling of the Haemophilus influenzae core
and supragenomes based on the complete genomic sequences of Rd and
12 clinical nontypeable strains
JOURNAL (er) Genome Biol. 8 (6), R103 (2007) In press
PUBMED 17550610
REFERENCE 2 (bases 1 to 1813033)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (05-SEP-2007) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (bases 1 to 1813033)
AUTHORS Ehrlich,G.D.
TITLE Direct Submission
JOURNAL Submitted (10-APR-2007) Center for Genomic Sciences,
Allegheny-Singer Research Institute, 320 E. North Ave. 11th Floor,
Pittsburgh, PA 15212-4772, USA
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. The reference sequence was derived from CP000671.
Annotation was added by the NCBI Prokaryotic Genomes Automatic
Annotation Pipeline Group. Information about the Pipeline can be
found here:
http://www.ncbi.nlm.nih.gov/genomes/static/Pipeline.html. Please be
aware that the annotation is done automatically with little or no
manual curation.
Annotation updated by the NCBI Prokaryotic Genomes Automatic
Annotation Pipeline Group on September 9, 2007.
COMPLETENESS: full length.
Расположение РНК[]
| Начало | Конец | Направление | Длина | PID | Ген | COG | Комментарий |
|---|---|---|---|---|---|---|---|
| 146573 | 146658 | - | 86 | 148825133 | CGSHiEE_t09342 | - | 15 Leu tRNA |
| 211332 | 211407 | + | 76 | 148825133 | CGSHiEE_t09344 | - | 10 Lys tRNA |
| 211431 | 211506 | + | 76 | 148825133 | CGSHiEE_t09346 | - | 10 Lys tRNA |
| 263735 | 263824 | + | 90 | 148825133 | CGSHiEE_t09348 | - | 08 Ser tRNA |
| 314773 | 314848 | - | 76 | 148825133 | CGSHiEE_t09350 | - | 13 Val tRNA |
| 314901 | 314976 | - | 76 | 148825133 | CGSHiEE_t09352 | - | 13 Val tRNA |
| 315035 | 315110 | - | 76 | 148825133 | CGSHiEE_t09354 | - | 13 Val tRNA |
| 315154 | 315229 | - | 76 | 148825133 | CGSHiEE_t09356 | - | 13 Val tRNA |
| 316923 | 316998 | + | 76 | 148825133 | CGSHiEE_t09358 | - | 02 Ala tRNA |
| 336292 | 336381 | + | 90 | 148825133 | CGSHiEE_t09360 | - | 08 Ser tRNA |
| 376402 | 377942 | + | 1541 | 148825133 | CGSHiEE_r09322 | - | 16S ribosomal RNA |
| 378074 | 378149 | + | 76 | 148825133 | CGSHiEE_t09362 | - | 04 Glu tRNA |
| 378420 | 378961 | + | 542 | 148825133 | CGSHiEE_r09334 | - | 23S ribosomal RNA |
| 378962 | 379073 | + | 112 | 148825133 | CGSHiEE_r09334 | - | intervening sequence |
| 379074 | 381420 | + | 2347 | 148825133 | CGSHiEE_r09334 | - | 23S ribosomal RNA |
| 381644 | 381763 | + | 120 | 148825133 | CGSHiEE_r09310 | - | 5S ribosomal RNA |
| 381938 | 382014 | + | 77 | 148825133 | CGSHiEE_t09364 | - | 06 Asp tRNA |
| 382043 | 382118 | + | 76 | 148825133 | CGSHiEE_t09366 | - | 20 Trp tRNA |
| 393538 | 393614 | + | 77 | 148825133 | CGSHiEE_t09368 | - | 03 Pro tRNA |
| 393662 | 393738 | + | 77 | 148825133 | CGSHiEE_t09370 | - | 11 Arg tRNA |
| 409546 | 411086 | + | 1541 | 148825133 | CGSHiEE_r09324 | - | 16S ribosomal RNA |
| 411218 | 411293 | + | 76 | 148825133 | CGSHiEE_t09372 | - | 04 Glu tRNA |
| 411564 | 412105 | + | 542 | 148825133 | CGSHiEE_r09336 | - | 23S ribosomal RNA |
| 412106 | 412217 | + | 112 | 148825133 | CGSHiEE_r09336 | - | intervening sequence |
| 412218 | 414564 | + | 2347 | 148825133 | CGSHiEE_r09336 | - | 23S ribosomal RNA |
| 414756 | 414875 | + | 120 | 148825133 | CGSHiEE_r09312 | - | 5S ribosomal RNA |
| 513185 | 513261 | + | 77 | 148825133 | CGSHiEE_t09374 | - | 06 Asp tRNA |
| 513285 | 513361 | + | 77 | 148825133 | CGSHiEE_t09376 | - | 06 Asp tRNA |
| 521398 | 521473 | - | 76 | 148825133 | CGSHiEE_t09378 | - | 10 Lys tRNA |
| 521524 | 521610 | - | 87 | 148825133 | CGSHiEE_t09380 | - | 15 Leu tRNA |
| 521615 | 521690 | - | 76 | 148825133 | CGSHiEE_t09382 | - | 01 Gly tRNA |
| 529620 | 529696 | + | 77 | 148825133 | CGSHiEE_t09384 | - | 16 Met tRNA |
| 532111 | 532187 | + | 77 | 148825133 | CGSHiEE_t09386 | - | 11 Arg tRNA |
| 532214 | 532289 | + | 76 | 148825133 | CGSHiEE_t09388 | - | 09 His tRNA |
| 532311 | 532387 | + | 77 | 148825133 | CGSHiEE_t09390 | - | 03 Pro tRNA |
| 532564 | 534103 | + | 1540 | 148825133 | CGSHiEE_r09326 | - | 16S ribosomal RNA |
| 534183 | 534259 | + | 77 | 148825133 | CGSHiEE_t09392 | - | 14 Ile tRNA |
| 534345 | 534420 | + | 76 | 148825133 | CGSHiEE_t09394 | - | 02 Ala tRNA |
| 534826 | 535367 | + | 542 | 148825133 | CGSHiEE_r09338 | - | 23S ribosomal RNA |
| 535368 | 535479 | + | 112 | 148825133 | CGSHiEE_r09338 | - | intervening sequence |
| 535480 | 536096 | + | 617 | 148825133 | CGSHiEE_r09338 | - | 23S ribosomal RNA |
| 536097 | 536217 | + | 121 | 148825133 | CGSHiEE_r09338 | - | intervening sequence |
| 536218 | 537939 | + | 1722 | 148825133 | CGSHiEE_r09338 | - | 23S ribosomal RNA |
| 538131 | 538250 | + | 120 | 148825133 | CGSHiEE_r09314 | - | 5S ribosomal RNA |
| 575938 | 576013 | - | 76 | 148825133 | CGSHiEE_t09396 | - | 10 Lys tRNA |
| 576064 | 576150 | - | 87 | 148825133 | CGSHiEE_t09398 | - | 15 Leu tRNA |
| 576178 | 576251 | - | 74 | 148825133 | CGSHiEE_t09400 | - | 19 Cys tRNA |
| 576258 | 576333 | - | 76 | 148825133 | CGSHiEE_t09402 | - | 01 Gly tRNA |
| 620061 | 620150 | - | 90 | 148825133 | CGSHiEE_t09404 | - | 08 Ser tRNA |
| 675304 | 676843 | + | 1540 | 148825133 | CGSHiEE_r09328 | - | 16S ribosomal RNA |
| 676923 | 676999 | + | 77 | 148825133 | CGSHiEE_t09406 | - | 14 Ile tRNA |
| 677085 | 677160 | + | 76 | 148825133 | CGSHiEE_t09408 | - | 02 Ala tRNA |
| 677566 | 678107 | + | 542 | 148825133 | CGSHiEE_r09340 | - | 23S ribosomal RNA |
| 678108 | 678219 | + | 112 | 148825133 | CGSHiEE_r09340 | - | intervening sequence |
| 678220 | 678836 | + | 617 | 148825133 | CGSHiEE_r09340 | - | 23S ribosomal RNA |
| 678837 | 678957 | + | 121 | 148825133 | CGSHiEE_r09340 | - | intervening sequence |
| 678958 | 680679 | + | 1722 | 148825133 | CGSHiEE_r09340 | - | 23S ribosomal RNA |
| 680920 | 681038 | + | 119 | 148825133 | CGSHiEE_r09316 | - | 5S ribosomal RNA |
| 702662 | 702737 | - | 76 | 148825133 | CGSHiEE_t09410 | - | 01 Gly tRNA |
| 702762 | 702837 | - | 76 | 148825133 | CGSHiEE_t09412 | - | 01 Gly tRNA |
| 823150 | 823225 | + | 76 | 148825133 | CGSHiEE_t09414 | - | 07 Asn tRNA |
| 855427 | 855503 | + | 77 | 148825133 | CGSHiEE_t09416 | - | 16 Met tRNA |
| 967932 | 968017 | - | 86 | 148825133 | CGSHiEE_t09418 | - | 15 Leu tRNA |
| 1089273 | 1089349 | - | 77 | 148825133 | CGSHiEE_t09420 | - | 13 Val tRNA |
| 1157323 | 1157397 | - | 75 | 148825133 | CGSHiEE_t09422 | - | 05 Gln tRNA |
| 1157445 | 1157519 | - | 75 | 148825133 | CGSHiEE_t09424 | - | 05 Gln tRNA |
| 1157548 | 1157632 | - | 85 | 148825133 | CGSHiEE_t09426 | - | 15 Leu tRNA |
| 1157638 | 1157714 | - | 77 | 148825133 | CGSHiEE_t09428 | - | 16 Met tRNA |
| 1462617 | 1462693 | + | 77 | 148825133 | CGSHiEE_t09430 | - | 16 Met tRNA |
| 1627845 | 1627920 | - | 76 | 148825133 | CGSHiEE_t09432 | - | 07 Asn tRNA |
| 1627923 | 1627998 | - | 76 | 148825133 | CGSHiEE_t09434 | - | 17 Phe tRNA |
| 1675760 | 1675879 | - | 120 | 148825133 | CGSHiEE_r09318 | - | 5S ribosomal RNA |
| 1676104 | 1677826 | - | 1723 | 148825133 | CGSHiEE_r09342 | - | 23S ribosomal RNA |
| 1677827 | 1677947 | - | 121 | 148825133 | CGSHiEE_r09342 | - | intervening sequence |
| 1677948 | 1678564 | - | 617 | 148825133 | CGSHiEE_r09342 | - | 23S ribosomal RNA |
| 1678565 | 1678676 | - | 112 | 148825133 | CGSHiEE_r09342 | - | intervening sequence |
| 1678677 | 1679218 | - | 542 | 148825133 | CGSHiEE_r09342 | - | 23S ribosomal RNA |
| 1679624 | 1679699 | - | 76 | 148825133 | CGSHiEE_t09436 | - | 02 Ala tRNA |
| 1679785 | 1679861 | - | 77 | 148825133 | CGSHiEE_t09438 | - | 14 Ile tRNA |
| 1679941 | 1681480 | - | 1540 | 148825133 | CGSHiEE_r09330 | - | 16S ribosomal RNA |
| 1699571 | 1699665 | + | 95 | 148825133 | CGSHiEE_t09440 | - | Sec tRNA |
| 1777253 | 1777347 | + | 95 | 148825133 | CGSHiEE_t09442 | - | 08 Ser tRNA |
| 1777368 | 1777444 | + | 77 | 148825133 | CGSHiEE_t09444 | - | 11 Arg tRNA |
| 1777502 | 1777578 | + | 77 | 148825133 | CGSHiEE_t09446 | - | 11 Arg tRNA |
| 1787499 | 1787574 | - | 76 | 148825133 | CGSHiEE_t09448 | - | 12 Thr tRNA |
| 1787578 | 1787652 | - | 75 | 148825133 | CGSHiEE_t09450 | - | 01 Gly tRNA |
| 1787695 | 1787779 | - | 85 | 148825133 | CGSHiEE_t09452 | - | 18 Tyr tRNA |
| 1787809 | 1787884 | - | 76 | 148825133 | CGSHiEE_t09454 | - | 12 Thr tRNA |
| 1798519 | 1798638 | - | 120 | 148825133 | CGSHiEE_r09320 | - | 5S ribosomal RNA |
| 1798862 | 1801208 | - | 2347 | 148825133 | CGSHiEE_r09344 | - | 23S ribosomal RNA |
| 1801209 | 1801320 | - | 112 | 148825133 | CGSHiEE_r09344 | - | intervening sequence |
| 1801321 | 1801862 | - | 542 | 148825133 | CGSHiEE_r09344 | - | 23S ribosomal RNA |
| 1802133 | 1802208 | - | 76 | 148825133 | CGSHiEE_t09456 | - | 04 Glu tRNA |
| 1802340 | 1803880 | - | 1541 | 148825133 | CGSHiEE_r09332 | - | 16S ribosomal RNA |